Hsy-MIR171ap

Basic info.

• miRNA locus ID
• Hsy-MIR171ap

• miRNA locus accession
• PmiREN009454

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01000195.1  255818  255946  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

      --GC     AAA     C          A            A  -  -GA      - ATAG
 GGGAA    AAAAT   GAAAG GATATTGGTG GGTTCAATCTGA GA CG   TTTACG C    
 |||||    |||||   ||||| |||||||||| |||||||||||| || ||   |||||| |    A
 TCCTT    TTTTG   CTTTC CTATAACCGC CCGAGTTAGACT CT GC   AAATGC G    
T     ATAC     -AC     A          G            -  A  ATA      T GCTC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference