Hsy-MIR171aq

Basic info.

• miRNA locus ID
• Hsy-MIR171aq

• miRNA locus accession
• PmiREN009455

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01000219.1  287622  287743  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

AGTATACGAAT    --GAT  A                       G   TT C     TAA
           GCAA     CG GATATTGGTGCGGTTCAATCAGA AAC  T ACTCT   
           ||||     || ||||||||||||||||||||||| |||  | |||||   G
           CGTT     GC CTATAACCGTGCCGAGTTAGTTT TTG  A TGAGA   
CTGTATATATC    AACAT  A                       A   TT -     TAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference