Hsy-MIR171ar

Basic info.

• miRNA locus ID
• Hsy-MIR171ar

• miRNA locus accession
• PmiREN009456

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01000229.1  359743  359864  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

      AAAG  AG    ATAT  G                    C  G     C     AAAG
    AC    GA  AATG    CG GATATTGGTGCGGTTCAATT GA AGCAT GCTCT    
    ||    ||  ||||    || |||||||||||||||||||| || ||||| |||||     
    TG    CT  TTAC    GC CTATAACCGTGCCGAGTTAG CT TTGTA TGAGA    
ACAT  -AGG  -A    CAAT  A                    T  A     T     GCTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference