Hsy-MIR171as

Basic info.

• miRNA locus ID
• Hsy-MIR171as

• miRNA locus accession
• PmiREN009457

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01000296.1  185591  185712  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

AATATACAATT   --A  T  A           A        A   -   TTTC     TAA
           GCG   GA CG GATATTGGTGC GTTCAATC GAG AAC    ACTCT   
           |||   || || ||||||||||| |||||||| ||| |||    |||||   G
           CGT   CT GC CTATAACCGTG CGAGTTAG CTT TTG    TGAGA   
ATATATATACT   AAA  T  A           C        -   A   -TTT     TAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference