Hsy-MIR171at

Basic info.

• miRNA locus ID
• Hsy-MIR171at

• miRNA locus accession
• PmiREN009458

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01000534.1  285400  285527  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TGGGAAGCAAAAAA   A  C          A            A   -      -    ATAA
                GAA AG GATGTTGGTG GGTTCAATCTGA GAT GGATTT ACGG    
                ||| || |||||||||| |||||||||||| ||| |||||| ||||    T
                CTT TC CTATAACCGC CCGAGTTAGACT CTA TCTAAA TGCT    
TTAAGTTTCTCATTAC   C  A          G            -   G      A    GACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference