Hsy-MIR171au

Basic info.

• miRNA locus ID
• Hsy-MIR171au

• miRNA locus accession
• PmiREN009459

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01001184.1  253403  253535  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TGAG       --------       ATC          A         C  A  -  -GA      C  ATTTG
    AGAGAGA        GAGAGAG   GATATTGGTG GGTTCAATC GA GA CG   TTTACG AT     
    |||||||        |||||||   |||||||||| ||||||||| || || ||   |||||| ||      
    TCTCTTT        CTTTTTC   CTATAACCGC CCGAGTTAG CT CT GT   AAATGC TA     
           TCGTTTCA       --A          G         A  -  A  ATA      T  CTTAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference