Hsy-MIR171av

Basic info.

• miRNA locus ID
• Hsy-MIR171av

• miRNA locus accession
• PmiREN009460

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01001899.1  160712  160844  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

GGTTAAACT       ----    C          A         C  AGAC      ACGCATATATGAA
         GATAAAG    AAAG GATATTGGTG GGTTCAATC GA    GGATTT             
         |||||||    |||| |||||||||| ||||||||| ||    ||||||              
         TTGTTTC    TTTC CTATAACCGC CCGAGTTAG CT    TAGCAT             
  TCCTCTT       ACCT    A          G         A  ---C      AAAATGCTAACTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference