Iba-MIR171a

Basic info.

• miRNA locus ID
• Iba-MIR171a

• miRNA locus accession
• PmiREN009902

• Organism
• Ipomoea batatas

• Genomic location
• Iba-CM008332.1  18616477  18616601  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   CAT       TAG   T  C         A     T       G   -----    GTTTAAAC
      GGAGAAG   ACA GG GTGATATTG TTCGG CTCATCT ATC     TGTT        
      |||||||   ||| || ||||||||| ||||| ||||||| |||     ||||        A
      TTTCTTC   TGT CT CACTATAAC AAGCC GAGTAGA TAG     CCGG        
CCTTTC       TTA   T  -         C     -       G   CTAGA    CCGGCCGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference