Iba-MIR171b

Basic info.

• miRNA locus ID
• Iba-MIR171b

• miRNA locus accession
• PmiREN009903

• Organism
• Ipomoea batatas

• Genomic location
• Iba-NXFB01000058.1  42160  42279  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   CATG      TAG   T  C         A     T       -    -   AAACA    GG
       GAGAAG   ACA GG GTGATATTG TTCGG CTCATCT GTTG TTT     GGCC  
       ||||||   ||| || ||||||||| ||||| ||||||| |||| |||     ||||   
       TTCTTC   TGT CT CACTATAAC AAGCC GAGTAGA TAGC AGA     CCGG  
CCTTTCT      TTA   T  -         C     -       G    T   -----    CC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference