Jcu-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  AAAGAAAGCAAGAA      C          A            A  -  -GA      TAATA
                AGAAAG GATGTTGGTG GGTTCAATCTGA GA CG   TTTACA     
                |||||| |||||||||| |||||||||||| || ||   ||||||      
                TCTTTC CTATAACCGC CCGAGTTAGACT CT GC   AAATGT     
TTAACTATCTGCATAC      A          G            -  A  AGA      TAAGA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_012214567.2 1.0 NA NA
XM_020682789.1 1.0 NA NA
XM_012222805.2 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference