Lsi-MIR171b

Basic info.

• miRNA locus ID
• Lsi-MIR171b

• miRNA locus accession
• PmiREN010378

• Organism
• Lagenaria siceraria

• Genomic location
• Lsi-MIMD01000175.1  495255  495374  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  CACGTTCATGTGTCT            T  A        TAT   TA  T     T ACT
                 TGCGATGTTGGT CG TTCAATCA   GAT  TA TTTGG C   
                 |||||||||||| || ||||||||   |||  || ||||| |    
                 ATGCTATAACCG GC GAGTTAGT   TTA  AT GAACT G   
CGGACCTCATTTTTAAT            C  C        --T   TG  T     T AAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference