Lsi-MIR171e

Basic info.

• miRNA locus ID
• Lsi-MIR171e

• miRNA locus accession
• PmiREN010395

• Organism
• Lagenaria siceraria

• Genomic location
• Lsi-MIMD01000120.1  758975  759091  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GTATGAAAATCGGAAAGCGA        A         C  A   G -         C
                      TATTGGTG GGTTCAATC GA GAT G ATTTTACAA 
                      |||||||| ||||||||| || ||| | ||||||||| G
                      ATAACCGC CCGAGTTAG CT CTA C TGAAGTGTT 
AGGATTTCTTCTTCTTTTCACT        G         T  -   G A         A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference