Mtr-MIR171p

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     GT  T         TAA            C       C       AAGTGAT       -    A    GT
       AC TGAAGTAGT   TGAGATATTGGC TGGTTCA TCAGACC       AAACCAC TAAG TACA  
       || |||||||||   |||||||||||| ||||||| |||||||       ||||||| |||| ||||   
       TG ACTTTATCA   ACTCTATAACCG GCCGAGT AGTTTGG       TTTGGTG GTTC ATGT  
GATCGTT  T         -TC            T       T       -----GT       T    -    TA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Medtr0092s0100.2 1.0 NA NA
Medtr4g026485.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference