Nnu-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   TAT     T   T    C         C       T     CA    -     ACA   A    A
      TGAAA GGT ACTG GATGTTGGC CGGTTCA TCAGA  AACA ACCTC   TGC GTGT 
      ||||| ||| |||| ||||||||| ||||||| |||||  |||| |||||   ||| |||| T
      ACTTT TCA TGAC CTATAACCG GCCGAGT AGTTT  TTGT TGGAG   ATG CACA 
CTCTTT     C   -    T         T       T     TA    G     ---   -    T

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_010256898.1 0.5 0 NA
XM_010260669.2 0.5 NA NA
XM_019198621.1 0.5 NA NA
XM_010280253.2 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference