Oeu-MIR171a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 CGT     T   -     T         T       C      G   AATGTA          A   AA
    TGAAA AGT CACTG GATGTTGGC TGGCTCA TCAGAA TCA      ATGAACTTTA GTT  
    ||||| ||| ||||| ||||||||| ||||||| |||||| |||      |||||||||| |||   
    ACTTT TCG GTGAT CTATAACCG GCCGAGT AGTTTT AGT      TACTTGGAAT TAG  
ATTT     T   T     T         C       T      -   GATTTA          G   AA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_022990202.1 0.0 NA NA
XM_022996362.1 0.0 NA NA
XM_022996363.1 0.0 NA NA
XM_023004562.1 0.0 NA NA
XM_023004563.1 0.0 NA NA
XM_023011788.1 0.0 NA NA
XM_023011794.1 0.0 NA NA
XM_023012610.1 0.0 NA NA
XM_023039983.1 0.0 NA NA
XM_023039984.1 0.0 NA NA
XM_023041415.1 0.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference