Oeu-MIR171i

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     ---       G   T  C         CT         G  CTTTCTGT    T    AT
TTCTG   AGGAGTA ACA GG GTGATATTG  TTCGGCTCA CA        TGCA TTGC  
|||||   ||||||| ||| || |||||||||  ||||||||| ||        |||| ||||   
GGGAC   TCTTCGT TGT CT CACTATAAC  AAGCCGAGT GT        ACGT GACG  
     GTT       A   T  -         -T         A  --------    T    AG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_023031239.1 0.0 0 NA
XR_002704367.1 0.0 0 NA
XM_023024719.1 0.5 0 NA
XM_023024720.1 0.5 0 NA
XM_023024415.1 1.5 NA NA
XM_023024416.1 1.5 NA NA
XM_023024417.1 1.5 NA NA
XM_023039016.1 1.5 NA NA
XM_023039017.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference