Ogl-MIR171d

Basic info.

• miRNA locus ID
• Ogl-MIR171d

• miRNA locus accession
• PmiREN013535

• Organism
• Oryza glaberrima

• Genomic location
• Ogl-ADWL01009095.1  11789  11887  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GAAA   -      G      TT        T             GTTC
      GAA GAAGAG ACATGG  TGGTATTG TTCGGCTCATGTC    
      ||| |||||| ||||||  |||||||| |||||||||||||    A
      CTT CTTCTT TGTACT  ACTATAAC AAGCCGAGTGTAG    
AAGAGA   A      A      -C        C             ACAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference