Oru-MIR171b

Basic info.

• miRNA locus ID
• Oru-MIR171b

• miRNA locus accession
• PmiREN013924

• Organism
• Oryza rufipogon

• Genomic location
• Oru-HG417172.1  4781242  4781359  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

       AC  CCT       ACGG        G               AGCTT T     GGAA
         GG   TGCGACG    GATATTGG GCGGTTCAATCAGAA     G GCTCC    
         ||   |||||||    |||||||| |||||||||||||||     | |||||     
         CC   ACGCTGC    CTATAACC TGCCGAGTTAGTTTT     C CGAGG    
GTTTCACTA  --T       ---A        G               CTCAT T     AGCG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference