Oru-MIR171f

Basic info.

• miRNA locus ID
• Oru-MIR171f

• miRNA locus accession
• PmiREN013928

• Organism
• Oryza rufipogon

• Genomic location
• Oru-HG417168.1  24069018  24069116  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GAAA   -      G      TT        T          GT GTTC
      GAA GAAGAG ACATGG  TGGTATTG TTCGGCTCAT  C    
      ||| |||||| ||||||  |||||||| ||||||||||  |    A
      CTT CTTCTT TGTACT  ACTATAAC AAGCCGAGTG  G    
AAGAGA   A      A      -C        C          TT ACAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference