Oru-MIR171g

Basic info.

• miRNA locus ID
• Oru-MIR171g

• miRNA locus accession
• PmiREN013929

• Organism
• Oryza rufipogon

• Genomic location
• Oru-HG417170.1  22953466  22953587  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

CATGGTT   CAAT   A  --  C          A         C   G           AGC
       GAT    GGA AG  AG GATATTGGTG GGTTCAATC GAT ATTGGTTTTAC   
       |||    ||| ||  || |||||||||| ||||||||| ||| |||||||||||   A
       CTA    CCT TC  TC CTATAACCGC CCGAGTTAG CTA TGACTAAAATG   
   CGTC   -TAT   C  CT  T          G         T   -           GTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference