Ogl-MIR171e

Basic info.

• miRNA locus ID
• Ogl-MIR171e

• miRNA locus accession
• PmiREN016138

• Organism
• Oryza glaberrima

• Genomic location
• Ogl-ADWL01012494.1  3528  3649  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TGGTTGATCAATGGAAAGAGC          A         C   G           AGC
                       GATATTGGTG GGTTCAATC GAT ATTGGTTTTAC   
                       |||||||||| ||||||||| ||| |||||||||||   A
                       CTATAACCGC CCGAGTTAG CTA TGACTAAAATG   
TTCGTCCTATATCCTCTCCTTCT          G         T   -           GTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference