Pam-MIR171b

Basic info.

• miRNA locus ID
• Pam-MIR171b

• miRNA locus accession
• PmiREN016561

• Organism
• Persea americana

• Genomic location
• Pam-NXHZ01002541.1  54070  54203  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   TTC     T   T    T         C       C   ---        -   ----A     AAACCA
      TGAAA GGT ACTG GATGTTGGC CGGCTCA TCA   GACAACTT CTT     GTTCT      
      ||||| ||| |||| ||||||||| ||||||| |||   |||||||| |||     |||||       
      ACTTT TCA TGAT CTATAACCG GCCGAGT AGT   CTGTTGAA GAA     CAAGA      
TTCCTA     C   -    T         T       T   CTT        A   AAGTA     AAAAGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference