Pvu-MIR171g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
    A      -ACC     AACGG         C         A        AT    A   GT
     GAAGGG    GGTTC     GATATTGGT CGGTTCAAT AGAAAGCA  GCTC AAA  
     ||||||    |||||     ||||||||| ||||||||| ||||||||  |||| |||   
     CTTCTC    CCGAG     CTATAACCG GCCGAGTTA TTTTTTGT  TGGG TTT  
CCACA      GTCA     ---CA         T         C        CC    A   TG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Phvul.008G143400.1 1.5 NA NA
Phvul.010G072700.2 1.5 NA NA
Phvul.010G072900.1 1.5 NA NA
Phvul.002G027500.1 2.0 1 NA
Phvul.008G165200.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference