Pda-MIR171b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   GA      T   T    T         C       C      -A   CTCCTAGTGCAGCA
     ATGAAA AGT ACTA GATGTTGGC CGGTTCA TCAGAA  GCA              
     |||||| ||| |||| ||||||||| ||||||| ||||||  |||              T
     TACTTT TCA TGAT CTATAACCG GCCGAGT AGTCTT  GCC              
TTCCC      C   -    T         T       T      GC   CCAGGTTTCGGAAG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_008779865.2 0.5 NA NA
XM_008797396.2 0.5 0 NA
XM_008798584.3 0.5 NA NA
XM_026806097.1 0.5 NA NA
XM_026806639.1 0.5 NA NA
XM_008788754.3 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference