Pda-MIR171g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GAA   -    AAG      T          A       A        --   TTA
     GAA GAAG   ACATGA GTGATATTGG TCGGCTC TCTCTTTT  TGA   
     ||| ||||   |||||| |||||||||| ||||||| ||||||||  |||   A
     CTT CTTC   TGTACT CACTATAACC AGCCGAG GGAGAAGA  ACT   
CAACG   A    GTA      -          A       C        AG   TAG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_008784011.3 1.0 NA NA
XM_008809951.3 1.0 NA NA
XM_008792915.3 1.5 2 NA
XM_008792916.3 1.5 2 NA
XM_008794589.3 1.5 2 NA
XM_008794591.3 1.5 2 NA
XM_017843392.2 1.5 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference