Psa-MIR171d

Basic info.

• miRNA locus ID
• Psa-MIR171d

• miRNA locus accession
• PmiREN017266

• Organism
• Pisum sativum

• Genomic location
• Psa-PUCA013299414.1  3739  3854  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

             A  AA  TCAACGG         C         A       -        AGT
         AGAG AC  GT       GATATTGGT CGGTTCAAT AGAAAGT AAGGCTCG   
         |||| ||  ||       ||||||||| ||||||||| ||||||| ||||||||   A
         TCTC TG  CA       CTATAACCG GCCGAGTTA TTTTTCG TTCCGAGC   
TCCCACGCC    C  AG  -------         T         G       A        CGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference