Peu-MIR171c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
GATCCTC      A         -----     AA         A  C    C  T  GT
       GGTGGA ATTTGATGT     TGGCA  GCTCAATCA AT AAAG AC CA  
       |||||| |||||||||     |||||  ||||||||| || |||| || ||  G
       CTATCT TAAATTACG     ACCGT  CGAGTTAGT TA TTTC TG GT  
   CTAT      C         CTATA     GC         C  C    T  T  TG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_011019156.1 0.5 NA NA
XM_011019160.1 0.5 NA NA
XM_011019161.1 0.5 NA NA
XM_011019998.1 0.5 NA NA
XM_011019999.1 0.5 NA NA
XM_011035187.1 0.5 NA NA
XM_011035194.1 0.5 NA NA
XM_011035203.1 0.5 NA NA
XM_011035657.1 0.5 NA NA
XR_841543.1 0.5 NA NA
XM_011027426.1 1.5 NA NA
XM_011001652.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference