Peu-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GCTAAGGAAGCAAAAG    C          A         C  A  -  -GA      C  GAA
                  AAAG GATGTTGGTG GGTTCAATC GA GA CG   TTTACA GT   
                  |||| |||||||||| ||||||||| || || ||   |||||| ||   A
                  TTTC CTATAACCGC CCGAGTTAG CT CT GC   AAATGT TA   
TTTCGTTCATTTGGGCTA    A          G         A  -  A  ATA      -  ATG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_011019156.1 1.0 NA NA
XM_011019160.1 1.0 NA NA
XM_011019161.1 1.0 NA NA
XM_011019998.1 1.0 NA NA
XM_011019999.1 1.0 NA NA
XM_011035187.1 1.0 NA NA
XM_011035194.1 1.0 NA NA
XM_011035203.1 1.0 NA NA
XM_011035657.1 1.0 NA NA
XR_841543.1 1.0 NA NA
XM_011014889.1 2.0 NA NA
XM_011029272.1 2.0 1 NA
XM_011029277.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference