Ppe-MIR171a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  AAT   T    TTA   G         C         A         T    TAAG
     GGA CGGT   ACG GATATTGGT CGGTTCAAT AGAAAGCAG GCTC    
     ||| ||||   ||| ||||||||| ||||||||| ||||||||| ||||    T
     CCT GTCA   TGC CTATAACCG GCCGAGTTA TTTTTCGTC CGAG    
TATTT   T    CCG   A         T         G         T    TTCG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Prupe.3G216900.1 0.0 NA NA
Prupe.2G138400.1 0.5 NA NA
Prupe.5G072300.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference