Qro-MIR171a

Basic info.

• miRNA locus ID
• Qro-MIR171a

• miRNA locus accession
• PmiREN018124

• Organism
• Quercus robur

• Genomic location
• Qro-LT985733.1  20328730  20328843  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

ATACTTG   -----   -    ---                      A    T  CT     TG
       GTG     GAG TTCA   TGATGTTGGCATGGCTCAATCA ATCA AG  CTCAA  
       |||     ||| ||||   |||||||||||||||||||||| |||| ||  |||||   
       CAC     CTC GAGT   ACTATAACCGTGCCGAGTTAGT TAGT TC  GAGTT  
          TAAAT   T    TAC                      C    T  CT     TG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference