Qro-MIR171b

Basic info.

• miRNA locus ID
• Qro-MIR171b

• miRNA locus accession
• PmiREN018125

• Organism
• Quercus robur

• Genomic location
• Qro-LT985734.1  21789133  21789276  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   GTT     T   T  TT          C C     T     --AAG       CATT       AAAA   TT
      TGAAA AGT AC  TGATATTGGC C GCTCA TCAGA     AAGTACG    TCATGGC    AGC  
      ||||| ||| ||  |||||||||| | ||||| |||||     |||||||    |||||||    |||   
      ACTTT TCG TG  ACTATAACCG G CGAGT AGTTT     TTCATGT    GGTACTG    TTG  
TTTAGT     T   -  TT          T C     T     CTGTA       -ATT       -ATA   AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference