Qro-MIR171c

Basic info.

• miRNA locus ID
• Qro-MIR171c

• miRNA locus accession
• PmiREN018126

• Organism
• Quercus robur

• Genomic location
• Qro-LT985738.1  54590516  54590630  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

ATGT    AAT   T   TT         C       C      -    TT     GTT
    GTGA   GGT ACT  GATATTGGC CGGTTCA TCAGAA CAAA  AATGG   
    ||||   ||| |||  ||||||||| ||||||| |||||| ||||  |||||   G
    CACT   TCG TGA  CTATAACCG GCCGAGT AGTTTT GTTT  TTACT   
 TTT    CTC   -   CT         T       T      A    -T     GTC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference