Sla-MIR171a

Basic info.

• miRNA locus ID
• Sla-MIR171a

• miRNA locus accession
• PmiREN018830

• Organism
• Silene latifolia

• Genomic location
• Sla-LHUT01025217.1  3411  3527  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

     GA  -ACGT             TTC             -    C   T   TGGG
 TAAG  GA     GCATGGGATGTTG   CGGTTCAATCAGA AAAC GGG TCT    
 ||||  ||     |||||||||||||   ||||||||||||| |||| ||| |||     
 ATTC  CT     TGTGCCCTATAAC   GCCGAGTTAGTTT TTTG CTC AGA    
T    AA  AATTT             CGT             A    T   T   TATT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference