Sla-MIR171e

Basic info.

• miRNA locus ID
• Sla-MIR171e

• miRNA locus accession
• PmiREN018834

• Organism
• Silene latifolia

• Genomic location
• Sla-LHUT01204023.1  274  390  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATGCATGAACAT          C                  -    C   T   TAGC
              GCATGGGATA TGGTGCGGTTCAATCAGA AAAC GAG TCT    
              |||||||||| |||||||||||||||||| |||| ||| |||     
              TGTACCCTAT ACCGTGCCGAGTTAGTTT TTTG CTC AGA    
TTTTCATATAATTT          A                  A    C   T   TAAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference