Sha-MIR171a

Basic info.

• miRNA locus ID
• Sha-MIR171a

• miRNA locus accession
• PmiREN018932

• Organism
• Solanum habrochaites

• Genomic location
• Sha-CBYS010001524.1  73148  73265  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTTGATTGATCAACTTGG                            AT   A   TAA
                    GATGTTGGTGTGGTTCAATTAGATAACA  CTC ACG   
                    ||||||||||||||||||||||||||||  ||| |||    
                    CTATAACCGTGCCGAGTTAGTTTATTGT  GAG TGT   
TACAATAAAAGAAATGTACA                            CT   A   TAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference