Sha-MIR171b

Basic info.

• miRNA locus ID
• Sha-MIR171b

• miRNA locus accession
• PmiREN018933

• Organism
• Solanum habrochaites

• Genomic location
• Sha-CBYS010012092.1  57839  57955  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  CAAAGGTATATC     A                   G      C  TT      TAA
              ATACG GATGTTGGTGCGGTTCAAT AGAAAG AG  GTTGAA   
              ||||| ||||||||||||||||||| |||||| ||  ||||||    
              TGTGC CTATAACCGTGCCGAGTTA TTTTTC TC  CAGTTT   
AAATGTCTTATCAC     A                   G      A  -T      TTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference