Sly-MIR171g

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  TTTGATTGATCA  T  C                             T   CAC   AA
              AC TG GATGTTGGTGTGGTTCAATTAGATAACAA CTC   GTA  
              || || ||||||||||||||||||||||||||||| |||   |||   
              TG AC CTATAACCGTGCCGAGTTAGTTTATTGTT GAG   TAT  
TACAATAAAAGAAA  T  A                             T   --A   TA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Solyc01g090950.3.1 0.5 NA NA
Solyc08g078800.1.1 0.5 0 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference