Sme-MIR171a

Basic info.

• miRNA locus ID
• Sme-MIR171a

• miRNA locus accession
• PmiREN019388

• Organism
• Solanum melongena

• Genomic location
• Sme-DF357319.1  74925  75039  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

      TAA   TT G            A           T   A     TT    CA
  TTAT   GAA  T GTGTGATATTGG ATGGCTCAATC AAT AAAAT  CCAA  
  ||||   |||  | |||||||||||| ||||||||||| ||| |||||  ||||  T
  GATG   TTT  A TATACTATAACC TGCCGAGTTAG TTA TTTTA  GGTT  
GA    TCG   CT G            G           T   A     CT    TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference