Sme-MIR171b

Basic info.

• miRNA locus ID
• Sme-MIR171b

• miRNA locus accession
• PmiREN019389

• Organism
• Solanum melongena

• Genomic location
• Sme-DF358858.1  43041  43154  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTT     C  T    C          C       C      AACA      AACT
     TGAAA AG AACT TGATATTGGC TGGTTCA TCAGAC    AAATGA    
     ||||| || |||| |||||||||| ||||||| ||||||    ||||||    A
     ACTTT TC TTGA GCTATAACCG GCCGAGT AGTTTG    TTTATT    
ATATC     C  T    C          T       T      -AAG      ATAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference