Sme-MIR171c

Basic info.

• miRNA locus ID
• Sme-MIR171c

• miRNA locus accession
• PmiREN019390

• Organism
• Solanum melongena

• Genomic location
• Sme-DF363682.1  22476  22591  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  AAGCTATAATAATAGA          A               C    TCC     AA
                  ATGATGTTGG ATGGCTCAATCAAAT AAAT   CCCAA  
                  |||||||||| ||||||||||||||| ||||   |||||  G
                  TACTATAACC TGCCGAGTTAGTTTA TTTA   GGGTT  
TTCCAATTCATTTTACTA          G               A    -CT     AT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference