Sme-MIR171d

Basic info.

• miRNA locus ID
• Sme-MIR171d

• miRNA locus accession
• PmiREN019391

• Organism
• Solanum melongena

• Genomic location
• Sme-DF358979.1  54792  54913  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

    TTGCAAGGTA   T     A       A                  CAGTT      TA
              ATT ATACG GATATTG TGCGGTTCAATGAGAAAG     GTCAAA  
              ||| ||||| ||||||| ||||||||||||||||||     ||||||  A
              TAG TGTGC CTATAAC GTGCCGAGTTATTTTTTT     CAGTTT  
TCTTAAATATCTCA   C     A       C                  -ATTC      TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference