Spe-MIR171f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
TAT   T      -----       C          A         C  A  -  -AG     GTTTT
   ATA TGAATT     AGAGAAG GATGTTGGTG GGTTCAATC GA GA CG   TTTAC     
   ||| ||||||     ||||||| |||||||||| ||||||||| || || ||   |||||     A
   TAT ACTTAA     TTTCTTT CTATAACCGC CCGAGTTAG CT CT GC   AAATG     
      T      CCATT       A          G         A  -  A  AAG     ATTTT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_015230113.1 0.0 NA NA
XM_015230114.1 0.0 NA NA
XM_015206540.1 1.0 NA NA
XM_015201787.1 2.0 NA NA
XM_015201788.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference