Spi-MIR171a

Basic info.

• miRNA locus ID
• Spi-MIR171a

• miRNA locus accession
• PmiREN019742

• Organism
• Solanum pimpinellifolium

• Genomic location
• Spi-AGFK01031483.1  278  407  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  CTA     C  T    TT         C       C      AAC      T     AT   TG
     TGAAA AG AACT  GATATTGGC TGGTTCA TCAGAC   AAAATG AAACT  ATT  
     ||||| || ||||  ||||||||| ||||||| ||||||   |||||| |||||  |||  A
     ACTTT TC TTGA  CTATAACCG GCCGAGT AGTTTG   TTTTGC TTTGA  TGG  
CTTTC     C  T    CT         T       T      -CT      T     GT   TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference