Spi-MIR171b

Basic info.

• miRNA locus ID
• Spi-MIR171b

• miRNA locus accession
• PmiREN019743

• Organism
• Solanum pimpinellifolium

• Genomic location
• Spi-AGFK01103351.1  8508  8625  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTTGATTGATCA  T  C                             T   CAC   AA
              AC TG GATGTTGGTGTGGTTCAATTAGATAACAA CTC   GTA  
              || || ||||||||||||||||||||||||||||| |||   |||   
              TG AC CTATAACCGTGCCGAGTTAGTTTATTGTT GAG   TAT  
TACAATAAAAGAAA  T  A                             T   --A   TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference