Stu-MIR171a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  CTAT    C  T    TT         C       C      AAC   AT      A    TA
      GAAA AG AACT  GATATTGGC TGGTTCA TCAGAC   AAA  GAAACT TATT  
      |||| || ||||  ||||||||| ||||||| ||||||   |||  |||||| ||||  A
      CTTT TC TTGA  CTATAACCG GCCGAGT AGTTTG   TTT  CTTTGA GTGG  
CTTTCT    C  T    CT         T       T      CCT   GT      G    TA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

PGSC0003DMT400012104 0.5 NA NA
PGSC0003DMT400066799 0.5 NA NA
PGSC0003DMT400033037 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference