Sha-MIR171g

Basic info.

• miRNA locus ID
• Sha-MIR171g

• miRNA locus accession
• PmiREN019924

• Organism
• Solanum habrochaites

• Genomic location
• Sha-CBYS010010631.1  31352  31468  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATTATGAGGAGTTGGTGTGA      A           T   A     TT      C
                      TGTTGG ATGGCTCAATC AAT AAAGT  CCAAAA 
                      |||||| ||||||||||| ||| |||||  |||||| A
                      ATAACC TGCCGAGTTAG TTA TTTTA  GGTTTT 
GAGAACATGTTTCTGCTATACT      G           T   A     CT      T

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference