Spi-MIR171e

Basic info.

• miRNA locus ID
• Spi-MIR171e

• miRNA locus accession
• PmiREN019952

• Organism
• Solanum pimpinellifolium

• Genomic location
• Spi-AGFK01172990.1  680  795  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATTATGAGGAGTTGGTGTGA      A           T   G     TT     CA
                      TGTTGG ATGGCTCAATC AAT AAAGT  CCAAA  
                      |||||| ||||||||||| ||| |||||  |||||   
                      ATAACC TGCCGAGTTAG TTA TTTTA  GGTTT  
AGAACATGTTTTCTGCTATACT      G           T   A     CT     TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference