Vun-MIR171d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  T        -C    TCAA  G         C         A        AT    AAACC
 G AGAGGGGA  CGGT    CG GATATTGGT CGGTTCAAT AGAAAGCA  GCTC     
 | ||||||||  ||||    || ||||||||| ||||||||| ||||||||  ||||     G
 T TCTCTTCT  GTCA    GC CTATAACCG GCCGAGTTA TTTTTTGT  TGGG     
C T        TC    CCGA  A         T         C        CC    CTTTT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Vigun05g163700.1 1.5 NA NA
Vigun10g103500.1 1.5 NA NA
Vigun10g103700.1 1.5 NA NA
Vigun02g134400.1 2.0 NA NA
Vigun08g091300.1 2.0 2 NA
Vigun09g168400.1 2.0 NA NA
Vigun09g168500.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference