Vun-MIR171f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 TTCT    --         C  C                  A      TTCAACCATT
     GCAA  AAGTAGACA GG GTGATATTGGTTTGGCTC TCTTAG          
     ||||  ||||||||| || |||||||||||||||||| ||||||          A
     CGTT  TTCGTTTGT TC CACTATAACTAAGCCGAG AGAGTT          
GTATA    AC         -  T                  C      CTTCTACTAT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Vigun08g091300.1 0.5 0 NA
Vigun09g168400.1 0.5 NA NA
Vigun09g168500.1 0.5 NA NA
Vigun04g007500.1 2.0 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference