Zma-MIR171h

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
        GA     ACG      C         T             - T   TC    G  TCTT
     GAG  AGGAG   ACATGG GTGGTATTG TTCGGCTCATGTC C TCT  GATC AG    
     |||  |||||   |||||| ||||||||| ||||||||||||| | |||  |||| ||     
     CTT  TTCTC   TGTACT CACTATAAC AAGCCGAGTGTAG G AGG  TTAG TT    
GAACC   AC     --A      -         C             T T   -T    G  GCCG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GRMZM2G032003_T01 5.0 NA 2 (1)
GRMZM2G001426_T01 NA NA 2 (1)
GRMZM2G011526_T01 NA NA 2 (1)
GRMZM2G095082_T02 NA NA 2 (1)
GRMZM2G168679_T01 NA NA 2 (1)
GRMZM2G055263_T01 0.0 0 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference